Journal
Liu, Y., Sun, S., Zhang, Y., Song, M., Tian, Y., Lockhart, PJ., . . . Dang, Z. (2024). Integrated transcriptome and proteome analyses reveal potential mechanisms in Stipa breviflora underlying adaptation to grazing.
Grassland Research. 3(1), 1-17
[Journal article]Authored by: Lockhart, P.Read article at Massey Research Online:
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Dang, Z., Li, J., Liu, Y., Song, M., Lockhart, PJ., Tian, Y., . . . Wang, Q. (2024). RADseq-based population genomic analysis and environmental adaptation of rare and endangered recretohalophyte Reaumuria trigyna.
Plant Genome. 17(1)
[Journal article]Authored by: Lockhart, P.Read article at Massey Research Online:
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Hulme, PE., Beggs, JR., Binny, RN., Bray, JP., Cogger, N., Dhami, MK., . . . Lockhart, PJ. (2023). Emerging advances in biosecurity to underpin human, animal, plant, and ecosystem health.
iScience. 26(9)
[Journal article]Authored by: Cogger, N., French, N., Lockhart, P.Read article at Massey Research Online:
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Rashni, B., Brown, KT., McLenachan, PA., Lockhart, PJ., Southgate, PC., & Lal, MM. (2023). Leech breach: a first record of the invasive freshwater leech Helobdella europaea (Hirudinea: Glossiphoniidae) in Fiji.
Pacific Conservation Biology.
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read article at Massey Research Online:
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Cliff, A., Guieysse, B., Brown, N., Lockhart, P., Dubreucq, E., & Plouviez, M. (2023). Polyphosphate synthesis is an evolutionarily ancient phosphorus storage strategy in microalgae.
Algal Research. 73
[Journal article]Authored by: Brown, N., Lockhart, P.Read article at Massey Research Online:
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Doyle, E., Blanchon, D., Wells, S., de Lange, P., Lockhart, P., Waipara, N., . . . Berry, TA. (2023). Internal Transcribed Spacer and 16S Amplicon Sequencing Identifies Microbial Species Associated with Asbestos in New Zealand.
Genes. 14(3)
[Journal article]Authored by: Lockhart, P.Read article at Massey Research Online:
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Pearson, SM., Griffiths, AG., Maclean, P., Larking, AC., Hong, SW., Jauregui, R., . . . Faville, MJ. (2023). Outlier analyses and genome-wide association study identify glgC and ERD6-like 4 as candidate genes for foliar water-soluble carbohydrate accumulation in Trifolium repens.
Frontiers in Plant Science. 13
[Journal article]Authored by: Lockhart, P., Tate, J.Read article at Massey Research Online:
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Pipite, A., Lockhart, PJ., McLenachan, PA., Christi, K., Kumar, D., Prasad, S., . . . Subramani, R. (2022). Isolation, antibacterial screening, and identification of bioactive cave dwelling bacteria in Fiji.
Frontiers in Microbiology. 13
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read article at Massey Research Online:
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Ehoche, OG., Arojju, SK., Cousins, G., O'Connor, JR., Maw, B., Tate, JA., . . . Griffiths, AG. (2022). Estimation of quantitative genetic parameters for dry matter yield and vegetative persistence-related traits in a white clover training population.
Crop Science. 62(6), 2169-2185
[Journal article]Authored by: Lockhart, P., Tate, J.Read article at Massey Research Online:
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Winkworth, RC., Neal, G., Ogas, RA., Nelson, BCW., McLenachan, PA., Bellgard, SE., . . . Lockhart, PJ. (2022). Comparative Analyses of Complete Peronosporaceae (Oomycota) Mitogenome Sequences - Insights into Structural Evolution and Phylogeny.
Genome Biology and Evolution. 14(4)
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read article at Massey Research Online:
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Undin, M., Lockhart, PJ., Hills, SFK., & Castro, I. (2020). Genetic Rescue and the Plight of Ponui Hybrids.
Frontiers in Conservation Science. 1
[Journal article]Authored by: Castro, I., Hills, S., Lockhart, P.Read article at Massey Research Online:
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Undin, M., Lockhart, PJ., Hills, SFK., Armstrong, DP., & Castro, I. (2021). Mixed Mating in a Multi-Origin Population Suggests High Potential for Genetic Rescue in North Island Brown Kiwi, Apteryx mantelli.
Frontiers in Conservation Science. 2
[Journal article]Authored by: Castro, I., Hills, S., Lockhart, P.Read article at Massey Research Online:
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Dang, Z., Jia, Y., Tian, Y., Li, J., Zhang, Y., Huang, L., . . . Li, FY. (2021). Transcriptome-wide gene expression plasticity in stipa grandis in response to grazing intensity differences.
International Journal of Molecular Sciences. 22(21)
[Journal article]Authored by: Lockhart, P.Read article at Massey Research Online:
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Aung, HL., Nyunt, WW., Fong, Y., Biggs, PJ., Winkworth, RC., Lockhart, PJ., . . . Aung, ST. (2021). Genomic profi ling of mycobacterium tuberculosis strains, myanmar.
Emerging Infectious Diseases. 27(11), 2847-2855
[Journal article]Authored by: Biggs, P., Lockhart, P.Read article at Massey Research Online:
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Winkworth, RC., Bellgard, SE., McLenachan, PA., & Lockhart, PJ. (2021). The mitogenome of Phytophthora agathidicida: Evidence for a not so recent arrival of the "kauri killing" Phytophthora in New Zealand.
PLoS ONE. 16(5 May)
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read article at Massey Research Online:
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Undin, M., Hills, SFK., Lockhart, PJ., & Castro, I. (2021). Gaps in genetic knowledge affect conservation management of kiwi (Apteryx) species.
Ibis. 163(4), 1155-1174
[Journal article]Authored by: Castro, I., Hills, S., Lockhart, P.Read Online:
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Abdullah, ., Mehmood, F., Shahzadi, I., Ali, Z., Islam, M., Naeem, M., . . . Waheed, MT. (2021). Correlations among oligonucleotide repeats, nucleotide substitutions, and insertion–deletion mutations in chloroplast genomes of plant family Malvaceae.
Journal of Systematics and Evolution. 59(2), 388-402
[Journal article]Authored by: Lockhart, P.Read Online:
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Ahmed, I., Lockhart, PJ., Agoo, EMG., Naing, KW., Nguyen, DV., Medhi, DK., . . . Matthews, PJ. (2020). Evolutionary origins of taro (Colocasia esculenta) in Southeast Asia.
Ecology and Evolution. 10(23), 13530-13543
[Journal article]Authored by: Lockhart, P.Read article at Massey Research Online:
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Dang, Z., Huang, L., Jia, Y., Lockhart, PJ., Fong, Y., & Tian, Y. (2020). Identification of genic SSRs provide a perspective for studying environmental adaptation in the endemic shrub Tetraena mongolica.
Genes. 11(3)
[Journal article]Authored by: Lockhart, P.Read Online:
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Winkworth, RC., Nelson, BCW., Bellgard, SE., Probst, CM., McLenachan, PA., & Lockhart, PJ. (2020). A LAMP at the end of the tunnel: A rapid, field deployable assay for the kauri dieback pathogen, Phytophthora agathidicida.
PLoS ONE. 15(1)
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Wolf, PG., Rowe, CA., Kinosian, SP., Der, JP., Lockhart, PJ., Shepherd, LD., . . . Thomson, JA. (2019). Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers.
American Journal of Botany. 106(10), 1365-1376
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Ginigini, J., Lecellier, GJ., Nicolas, M., Nour, M., Hnawia, E., Lebouvier, N., . . . Raharivelomanana, P. (2019). Chemodiversity of Calophyllum inophyllum L. oil bioactive components related to their specific geographical distribution in the South Pacific region.
PeerJ. 2019(5)
[Journal article]Authored by: Lockhart, P.Read Online:
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Dang, Z., McLenachan, PA., Lockhart, PJ., Waipara, N., Er, O., Reynolds, C., . . . Blanchon, D. (2019). Metagenome profiling identifies potential biocontrol agents for selaginella kraussiana in New Zealand.
Genes. 10(2)
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Htun, KS., Fong, Y., Kyaw, AA., Aung, ST., Oo, KZ., Zaw, T., . . . Hlaing, TM. (2018). Microbiome dataset from the upper respiratory tract of patients living with HIV, HIV/TB and TB from Myanmar.
Data in Brief. 21, 354-357
[Journal article]Authored by: Lockhart, P.Read Online:
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Kapust, N., Nelson-Sathi, S., Schönfeld, B., Hazkani-Covo, E., Bryant, D., Lockhart, PJ., . . . Martin, WF. (2018). Failure to recover major events of gene flux in real biological data due to method misapplication.
Genome Biology and Evolution. 10(5), 1198-1209
[Journal article]Authored by: Lockhart, P.Read Online:
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Voelckel, C., Gruenheit, N., & Lockhart, P. (2017). Evolutionary Transcriptomics and Proteomics: Insight into Plant Adaptation.
Trends in Plant Science. 22(6), 462-471
[Journal article]Authored by: Lockhart, P.Read Online:
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Lehnebach, CA., Winkworth, RC., Becker, M., Lockhart, PJ., & Hennion, F. (2017). Around the pole: evolution of sub-Antarctic Ranunculus.
Journal of Biogeography. 44(4), 875-886
[Journal article]Authored by: Lockhart, P.Read Online:
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Yabaki, M., Winkworth, RC., Mclenachan, PA., Aalbersberg, W., Winder, L., Trewick, SA., . . . Lockhart, PJ. (2016). Placing the Fijian Honeyeaters within the meliphagid radiation: Implications for origins and conservation.
Pacific Conservation Biology. 22(3), 262-271
[Journal article]Authored by: Lockhart, P., McLenachan, P., Trewick, S.Read Online:
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Woodhams, MD., Lockhart, PJ., & Holland, BR. (2016). Simulating and summarizing sources of gene tree incongruence.
Genome Biology and Evolution. 8(5), 1299-1315
[Journal article]Authored by: Lockhart, P.Read Online:
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Shepherd, LD., De Lange, PJ., Cox, S., McLenachan, PA., Roskruge, NR., & Lockhart, PJ. (2016). Evidence of a strong domestication bottleneck in the recently cultivated New Zealand endemic root crop, Arthropodium cirratum (Asparagaceae).
PLoS ONE. 11(3)
[Journal article]Authored by: Lockhart, P., McLenachan, P., Roskruge, N.Read Online:
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Hoffmann, A., Griffin, P., Dillon, S., Catullo, R., Rane, R., Byrne, M., . . . Sgrò, C. (2015). A framework for incorporating evolutionary genomics into biodiversity conservation and management.
Climate Change Responses. 2(1)
[Journal article]Authored by: Lockhart, P.Read Online:
Goremykin, VV., Nikiforova, SV., Cavalieri, D., Pindo, DM., & Lockhart, P. (2015). The root of flowering plants and total evidence.
Systematic Biology. 64(5), 879-891
[Journal article]Authored by: Lockhart, P.Read Online:
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Atherton, RA., Lockhart, PJ., Mclenachan, PA., De Lange, PJ., Wagstaff, SJ., & Shepherd, LD. (2015). A molecular investigation into the origin and relationships of karaka/ko¯pi (Corynocarpus laevigatus) in New Zealand.
Journal of the Royal Society of New Zealand. 45(4), 212-220
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Joly, S., Bryant, D., & Lockhart, PJ. (2015). Flexible methods for estimating genetic distances from single nucleotide polymorphisms.
Methods in Ecology and Evolution. 6(8), 938-948
[Journal article]Authored by: Lockhart, P.Read Online:
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Ku, C., Nelson-Sathi, S., Roettger, M., Sousa, FL., Lockhart, PJ., Bryant, D., . . . Martin, WF. (2015). Endosymbiotic origin and differential loss of eukaryotic genes.
Nature. 524(7566), 427-432
[Journal article]Authored by: Lockhart, P.Read Online:
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Marshall, CW., Chagné, D., Deusch, O., Gruenheit, N., McCallum, J., Bergin, D., . . . Wilcox, PL. (2015). A DNA-based diagnostic for differentiating among New Zealand endemic Podocarpus.
Tree Genetics and Genomes. 11(4)
[Journal article]Authored by: Lockhart, P.Read Online:
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Joly, S., Bryant, D., & Lockhart, PJ. (2015). Flexible methods for estimating genetic distances from single nucleotide polymorphisms.
Methods in Ecology and Evolution.
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Larkum, AWD., Becker, M., & Penny, D. (2014). We are Still Learning about the Nature of Species and Their Evolutionary Relationships.
Annals of the Missouri Botanical Garden. 100(1-2), 6-13
[Journal article]Authored by: Lockhart, P.Read Online:
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Joly, S., Heenan, PB., & Lockhart, PJ. (2014). Species radiation by niche shifts in new zealand's rockcresses (Pachycladon, brassicaceae).
Systematic Biology. 63(2), 192-202
[Journal article]Authored by: Lockhart, P.Read Online:
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Becker, M., Gruenheit, N., Steel, M., Voelckel, C., Deusch, O., Heenan, PB., . . . Lockhart, PJ. (2013). Hybridization may facilitate in situ survival of endemic species through periods of climate change.
Nature Climate Change. 3(12), 1039-1043
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Ahmed, I., Matthews, PJ., Biggs, PJ., Naeem, M., Mclenachan, PA., & Lockhart, PJ. (2013). Identification of chloroplast genome loci suitable for high-resolution phylogeographic studies of Colocasia esculenta (L.) Schott (Araceae) and closely related taxa.
Molecular Ecology Resources. 13(5), 929-937
[Journal article]Authored by: Biggs, P., Lockhart, P., McLenachan, P.Read Online:
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Wang, J., McLenachan, PA., Biggs, PJ., Winder, LH., Schoenfeld, BIK., Narayan, VV., . . . Lockhart, PJ. (2013). Environmental bio-monitoring with high-throughput sequencing.
Briefings in Bioinformatics. 14(5), 575-588
[Journal article]Authored by: Biggs, P., Lockhart, P., McLenachan, P.Read Online:
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Dagan, T., Roettger, M., Stucken, K., Landan, G., Koch, R., Major, P., . . . Martin, WF. (2013). Genomes of stigonematalean cyanobacteria (subsection V) and the evolution of oxygenic photosynthesis from prokaryotes to plastids.
Genome Biology and Evolution. 5(1), 31-44
[Journal article]Authored by: Lockhart, P.Read Online:
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Goremykin, VV., Nikiforova, SV., Biggs, PJ., Zhong, B., Delange, P., Martin, W., . . . Lockhart, PJ. (2013). The evolutionary root of flowering plants.
Systematic Biology. 62(1), 50-61
[Journal article]Authored by: Biggs, P., Lockhart, P., McLenachan, P.Read Online:
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Ahmed, I., Biggs, PJ., Matthews, PJ., Collins, LJ., Hendy, MD., & Lockhart, PJ. (2012). Mutational dynamics of aroid chloroplast genomes.
Genome Biology and Evolution. 4(12), 1316-1323
[Journal article]Authored by: Biggs, P., Lockhart, P.Read Online:
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Voelckel, C., Gruenheit, N., Biggs, P., Deusch, O., & Lockhart, P. (2012). Chips and tags suggest plant-environment interactions differ for two alpine Pachycladon species.
BMC Genomics. 13(1)
[Journal article]Authored by: Biggs, P., Lockhart, P.Read Online:
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Singh, SK., Khurma, UR., & Lockhart, PJ. (2012). Distribution and diversity of root-knot nematodes in agricultural areas of Fiji.
Nematropica. 42(1), 16-25
[Journal article]Authored by: Lockhart, P.Read Abstract:
Goremykin, VV., Lockhart, PJ., Viola, R., & Velasco, R. (2012). The mitochondrial genome of Malus domestica and the import-driven hypothesis of mitochondrial genome expansion in seed plants.
Plant Journal. 71(4), 615-626
[Journal article]Authored by: Lockhart, P.Read Online:
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Singh, R., Narayan, V., Mclenachan, P., Winkworth, RC., Mitra, S., Lockhart, PJ., . . . Rao, D. (2012). Detection and diversity of pathogenic Vibrio from Fiji.
Environmental Microbiology Reports. 4(4), 403-411
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Goremykin, VV., Lockhart, PJ., Viola, R., & Velasco, R. (2012). The mitochondrial genome of Malus domestica and the import-driven hypothesis of mitochondrial genome expansion in seed plants.
Plant Journal.
[Journal article]Authored by: Lockhart, P.Read Abstract:
Gruenheit, N., Deusch, O., Esser, C., Becker, M., Voelckel, C., & Lockhart, P. (2012). Cutoffs and k-mers: Implications from a transcriptome study in allopolyploid plants.
BMC Genomics. 13(1)
[Journal article]Authored by: Lockhart, P.Read Online:
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Zhong, B., Deusch, O., Goremykin, VV., Penny, D., Biggs, PJ., Atherton, RA., . . . Lockhart, PJ. (2011). Systematic error in seed plant phylogenomics.
Genome Biology and Evolution. 3(1), 1340-1348
[Journal article]Authored by: Biggs, P., Lockhart, P.Read Online:
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Woo, VL., Funke, MM., Smith, JF., Lockhart, PJ., & Garnock-Jones, PJ. (2011). New world origins of southwest pacific gesneriaceae: Multiple movements across and within the south pacific.
International Journal of Plant Sciences. 172(3), 434-457
[Journal article]Authored by: Lockhart, P.Read Online:
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Voelckel, C., Mirzaei, M., Reichelt, M., Luo, Z., Pascovici, D., Heenan, PB., . . . Lockhart, PJ. (2010). Transcript and protein profiling identify candidate gene sets of potential adaptive significance in New Zealand Pachycladon.
BMC Evolutionary Biology. 10(1)
[Journal article]Authored by: Lockhart, P.Read Online:
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Joly, S., Pfeil, BE., Oxelman, B., McLenachan, PA., & Lockhart, PJ. (2010). Erratum: A statistical approach for distinguishing hybridization and incomplete lineage sorting (American Naturalist 174 (E54-E70)).
American Naturalist. 175(5), 621-622
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
Atherton, RA., McComish, BJ., Shepherd, LD., Berry, LA., Albert, NW., & Lockhart, PJ. (2010). Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform.
PLANT METHODS. 6,
[Journal article]Authored by: Lockhart, P.Read Online:
Voelckel, C., Mirzaei, M., Reichelt, M., Luo, Z., Pascovici, D., Heenan, PB., . . . Lockhart, PJ. (2010). Transcript and protein profiling identify candidate gene sets of potential adaptive significance in New Zealand Pachycladon.
BMC EVOLUTIONARY BIOLOGY. 10,
[Journal article]Authored by: Lockhart, P.Read Online:
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Singh, SK., Khurma, UR., & Lockhart, PJ. (2010). Weed hosts of root-knot nematodes and their distribution in Fiji.
Weed Technology. 24(4), 607-612
[Journal article]Authored by: Lockhart, P.Read Abstract:
Emadzade, K., Lehnebach, C., Lockhart, P., & Hörandl, E. (2010). A molecular phylogeny, morphology and classification of genera of Ranunculeae (Ranunculaceae).
Taxon. 59(3), 809-828
[Journal article]Authored by: Lockhart, P.Read Abstract:
Atherton, R., McComish, B., Shepherd, L., Berry, L., Albert, N., & Lockhart, P. (2010). Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform.
Plant Methods. 6, 22-27
[Journal article]Authored by: Berry, L., Lockhart, P.Read Online:
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Sutherland, CJ., Tanomsing, N., Nolder, D., Oguike, M., Jennison, C., Pukrittayakamee, S., . . . Polley, SD. (2010). Two nonrecombining sympatric forms of the human malaria parasite plasmodium ovale occur globally.
Journal of Infectious Diseases. 201(10), 1544-1550
[Journal article]Authored by: Lockhart, P.Read Abstract:
Joly, S., McLenachan, PA., & Lockhart, PJ. (2009). A Statistical Approach for Distinguishing Hybridization and Incomplete Lineage Sorting.
AMERICAN NATURALIST. 174(2), E54-E70
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
Meudt, HM., Lockhart, PJ., & Bryant, D. (2009). Species delimitation and phylogeny of a New Zealand plant species radiation.
BMC Evolutionary Biology. 9(1)
[Journal article]Authored by: Lockhart, P.Read Online:
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Meudt, HM., Lockhart, PJ., & Bryant, D. (2009). Species delimitation and phylogeny of a New Zealand plant species radiation.
BMC EVOLUTIONARY BIOLOGY. 9,
[Journal article]Authored by: Lockhart, P.Read Online:
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Joly, S., McLenachan, PA., & Lockhart, PJ. (2009). A statistical approach for distinguishing hybridization and incomplete lineage sorting.
American Naturalist. 174(2)
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Joly, S., Heenan, PB., & Lockhart, PJ. (2009). A Pleistocene inter-tribal allopolyploidization event precedes the species radiation of Pachycladon (Brassicaceae) in New Zealand.
Molecular Phylogenetics and Evolution. 51(2), 365-372
[Journal article]Authored by: Lockhart, P.Read Online:
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Holland, BR., Benthin, S., Lockhart, PJ., Moulton, V., & Huber, KT. (2008). Using supernetworks to distinguish hybridization from lineage-sorting.
BMC Evolutionary Biology. 8(1)
[Journal article]Authored by: Lockhart, P.Read Online:
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Kneip, C., Voß, C., Lockhart, PJ., & Maier, UG. (2008). The cyanobacterial endosymbiont of the unicellular algae Rhopalodia gibba shows reductive genome evolution.
BMC Evolutionary Biology. 8(1)
[Journal article]Authored by: Lockhart, P.Read Online:
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Gruenheit, N., Lockhart, PJ., Steel, M., & Martin, W. (2008). Difficulties in testing for covarion-like properties of sequences under the confounding influence of changing proportions of variable sites.
Molecular Biology and Evolution. 25(7), 1512-1520
[Journal article]Authored by: Lockhart, P.Read Online:
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Kneip, C., Voss, C., Lockhart, PJ., & Maier, UG. (2008). The cyanobacterial endosymbiont of the unicellular algae Rhopalodia gibba shows reductive genome evolution.
BMC EVOLUTIONARY BIOLOGY. 8,
[Journal article]Authored by: Lockhart, P.Read Online:
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Voelckel, C., Heenan, PB., Janssen, B., Reichelt, M., Ford, K., Hofmann, R., . . . Lockhart, PJ. (2008). Transcriptional and biochemical signatures of divergence in natural populations of two species of New Zealand alpine Pachycladon.
Molecular Ecology. 17(21), 4740-4753
[Journal article]Authored by: Lockhart, P.Read Online:
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Howe, CJ., Barbrook, AC., Nisbet, RER., Lockhart, PJ., & Larkum, AWD. (2008). The origin of plastids.
Philosophical Transactions of the Royal Society B: Biological Sciences. 363(1504), 2675-2685
[Journal article]Authored by: Lockhart, P.Read Online:
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Holland, BR., Benthin, S., Lockhart, PJ., Moulton, V., & Huber, KT. (2008). Using supernetworks to distinguish hybridization from lineage-sorting.
BMC EVOLUTIONARY BIOLOGY. 8,
[Journal article]Authored by: Lockhart, P.Read Online:
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Lehnebach, CA., Rivero, M., Ezcurra, C., & Lockhart, PJ. (2007). A new northern limit for the distribution of ranunculus spegazzinii lourteig (ranunculaceae) in Chile.
Gayana - Botanica. 64(2), 239-241
[Journal article]Authored by: Lockhart, P.Read Online:
Morley, CG., McLenachan, PA., & Lockhart, PJ. (2007). Evidence for the presence of a second species of mongoose in the Fiji Islands.
Pacific Conservation Biology. 13(1), 29-34
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Abstract:
Kneip, C., Lockhart, P., Voß, C., & Maier, UG. (2007). Nitrogen fixation in eukaryotes - New models for symbiosis.
BMC Evolutionary Biology. 7
[Journal article]Authored by: Lockhart, P.Read Online:
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Whitfield, JB., & Lockhart, PJ. (2007). Deciphering ancient rapid radiations.
Trends in Ecology and Evolution. 22(5), 258-265
[Journal article]Authored by: Lockhart, P.Read Online:
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Martin, W., Roettger, M., & Lockhart, PJ. (2007). A reality check for alignments and trees.
Trends in Genetics. 23(10), 478-480
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lehnebach, CA., Cano, A., Monsalve, C., McLenachan, P., Hörandl, E., & Lockhart, P. (2007). Phylogenetic relationships of the monotypic Peruvian genus Laccopetalum (Ranunculaceae).
Plant Systematics and Evolution. 264(1-2), 109-116
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Larkum, AWD., Lockhart, PJ., & Howe, CJ. (2007). Shopping for plastids.
Trends in Plant Science. 12(5), 189-195
[Journal article]Authored by: Lockhart, P.Read Online:
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Knapp, M., Mudaliar, R., Havell, D., Wagstaff, SJ., & Lockhart, PJ. (2007). The drowning of New Zealand and the problem of agathis.
Systematic Biology. 56(5), 862-870
[Journal article]Authored by: Lockhart, P.Read Online:
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Heenan, PB., Mitchell, AD., McLenachan, PA., Lockhart, PJ., & de Lange, PJ. (2007). Natural variation and conservation of Lepidium sisymbrioides Hook, f. and L. solandri Kirk (Brassicaceae) in South Island, New Zealand, based on morphological and DNA sequence data.
New Zealand Journal of Botany. 45(1), 237-264
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Zauner, S., Lockhart, P., Stoebe-Maier, B., Gilson, P., McFadden, GI., & Maier, UG. (2006). Differential gene transfers and gene duplications in primary and secondary endosymbioses.
BMC EVOLUTIONARY BIOLOGY. 6
[Journal article]Authored by: Lockhart, P.Read Online:
Zauner, S., Lockhart, P., Stoebe-Maier, B., Gilson, P., McFadden, GI., & Maier, UG. (2006). Differential gene transfers and gene duplications in primary and secondary endosymbioses.
BMC Evolutionary Biology. 6
[Journal article]Authored by: Lockhart, P.Read Online:
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McBreen, K., & Lockhart, PJ. (2006). Reconstructing reticulate evolutionary histories of plants.
Trends in Plant Science. 11(8), 398-404
[Journal article]Authored by: Lockhart, P.Read Online:
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Heenan, PB., Lockhart, PJ., Kirkham, N., McBreen, K., & Havell, D. (2006). Relationships in the alpine Ranunculus haastii (Ranunculaceae) complex and recognition of R. piliferus and R. acraeus from southern New Zealand.
New Zealand Journal of Botany. 44(4), 425-441
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lockhart, P., Novis, P., Milligan, BG., Riden, J., Rambaut, A., & Larkum, T. (2006). Heterotachy and tree building: A case study with plastids and eubacteria.
Molecular Biology and Evolution. 23(1), 40-45
[Journal article]Authored by: Lockhart, P.Read Abstract:
Knapp, M., Stockler, K., Havell, D., Delsuc, F., Sebastiani, F., & Lockhart, PJ. (2005). Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech).
PLOS BIOLOGY. 3(1), 38-43
[Journal article]Authored by: Lockhart, P.Read Online:
Paun, O., Lehnebach, C., Johansson, JT., Lockhart, P., & Hörandl, E. (2005). Phylogenetic relationships and biogeography of Ranunculus and allied genera (Ranunculaceae) in the Mediterranean region and in the European Alpine System.
Taxon. 54(4), 911-930
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lockhart, P., & Steel, M. (2005). A tale of two processes..
Systematic biology. 54(6), 948-951
[Journal article]Authored by: Lockhart, P.
Winkworth, RC., Wagstaff, SJ., Glenny, D., & Lockhart, PJ. (2005). Evolution of the New Zealand mountain flora: Origins, diversification and dispersal.
Organisms Diversity and Evolution. 5(3), 237-247
[Journal article]Authored by: Lockhart, P.Read Abstract:
Hörandl, E., Paun, O., Johansson, JT., Lehnebach, C., Armstrong, T., Chen, L., . . . Lockhart, P. (2005). Phylogenetic relationships and evolutionary traits in Ranunculus s.l. (Ranunculaceae) inferred from ITS sequence analysis.
Molecular Phylogenetics and Evolution. 36(2), 305-327
[Journal article]Authored by: Lockhart, P.Read Abstract:
Winkworth, RC., Bryant, D., Lockhart, PJ., Havell, D., & Moulton, V. (2005). Biogeographic interpretation of splits graphs: Least squares optimization of branch lengths.
Systematic Biology. 54(1), 56-65
[Journal article]Authored by: Lockhart, P.Read Abstract:
Knapp, M., Stöckler, K., Havell, D., Delsuc, F., Sebastiani, F., & Lockhart, PJ. (2005). Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech).
PLoS Biology. 3(1)
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lockhart, PJ., & Penny, D. (2005). The place of Amborella within the radiation of angiosperms.
Trends in Plant Science. 10(5), 201-202
[Journal article]Authored by: Lockhart, P.
Prechtl, J., Kneip, C., Lockhart, P., Wenderoth, K., & Maier, UG. (2004). Intracellular spheroid bodies of Rhopalodia gibba have nitrogen-fixing apparatus of cyanobacterial origin.
Molecular Biology and Evolution. 21(8), 1477-1481
[Journal article]Authored by: Lockhart, P.Read Abstract:
Holland, BR., Huber, KT., Moulton, V., & Lockhart, PJ. (2004). Using consensus networks to visualize contradictory evidence for species phylogeny.
Molecular Biology and Evolution. 21(7), 1459-1461
[Journal article]Authored by: Lockhart, P.Read Abstract:
Esser, C., Ahmadinejad, N., Wiegand, C., Rotte, C., Sebastiani, F., Gelius-Dietrich, G., . . . Martin, W. (2004). A genome phylogeny for mitochondria among α-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes.
Molecular Biology and Evolution. 21(9), 1643-1660
[Journal article]Authored by: Lockhart, P.Read Abstract:
Perrie, LR., Brownsey, PJ., Lockhart, PJ., & Large, MF. (2003). Morphological and genetic diversity in the New Zealand fern Polystichum vestitum (Dryopteridaceae), with special reference to the Chatham Islands.
New Zealand Journal of Botany. 41(4), 581-602
[Journal article]Authored by: Lockhart, P.Read Online:
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Smissen, RD., Breitwieser, I., Ward, JM., McLenachan, PA., & Lockhart, PJ. (2003). Use of ISSR profiles and ITS-sequences to study the biogeography of alpine cushion plants in the genus Raoulia (Asteraceae).
Plant Systematics and Evolution. 239(1-2), 79-94
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Perrie, LR., Brownsey, PJ., Lockhart, PJ., & Large, MF. (2003). Morophological and genetic diversity in the New Zealand fern Polystichum vestitum (Dryopteridaceae). with special reference to the Chatham Islands.
New Zealand Journal of Botany. 41(4), 581-602
[Journal article]Authored by: Lockhart, P.
Perrie, LR., Brownsey, PJ., Lockhart, PJ., Brown, EA., & Large, MF. (2003). Biogeography of temperate Australasian Polystichum ferns as inferred from chloroplast sequence and AFLP.
Journal of Biogeography. 30(11), 1729-1736
[Journal article]Authored by: Lockhart, P.Read Abstract:
Kleine, T., Lockhart, P., & Batschauer, A. (2003). An Arabidopsis protein closely related to Synechocystis cryptochrome is targeted to organelles.
Plant Journal. 35(1), 93-103
[Journal article]Authored by: Lockhart, P.Read Abstract:
Perrie, LR., Brownsey, PJ., Lockhart, PJ., & Large, MF. (2003). Evidence for an allopolyploid complex in New Zealand Polystichum (Dryopteridaceae).
New Zealand Journal of Botany. 41(2), 189-215
[Journal article]Authored by: Lockhart, P.Read Abstract:
McBreen, K., Lockhart, PJ., McLenachan, PA., Scheele, S., & Robertson, AW. (2003). The use of molecular techniques to resolve relationships among traditional weaving cultivars of Phormium.
New Zealand Journal of Botany. 41(2), 301-310
[Journal article]Authored by: Lockhart, P., McLenachan, P., Robertson, A.Read Online:
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Stöcler, K., Daniel, IL., & Lockhart, PJ. (2002). New Zealand Kauri (Agathis australis (D.Don) Lindl., Araucariaceae) survives Oligocene drowning.
Systematic Biology. 51(5), 827-832
[Journal article]Authored by: Lockhart, P.
Winkworth, RC., Wagstaff, SJ., Glenny, D., & Lockhart, PJ. (2002). Plant dispersal N.E.W.S from New Zealand.
Trends in Ecology and Evolution. 17(11), 514-520
[Journal article]Authored by: Lockhart, P.Read Abstract:
Winkworth, RC., Grau, J., Robertson, AW., & Lockhart, PJ. (2002). The origins and evolution of the genus Myosotis L. (Boraginaceae).
Molecular Phylogenetics and Evolution. 24(2), 180-193
[Journal article]Authored by: Lockhart, P., Robertson, A.Read Online:
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McLenachan, PA., Lockhart, PJ., Havell, D., Glenny, D., Huson, D., & Jensen, U. (2001). Phylogeny, radiation, and transoceanic dispersal of New Zealand alpine buttercups: Molecular evidence under split decomposition.
Annals of the Missouri Botanical Garden. 88(3), 458-477
[Journal article]Authored by: Lockhart, P., McLenachan, P.
Lockhart, PJ., & Cameron, SA. (2001). Trees for bees.
Trends in Ecology and Evolution. 16(2), 84-88
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lockhart, PJ., McLenachan, PA., Havell, D., Glenny, D., Huson, D., & Jensen, U. (2001). Phylogeny, radiation, and transoceanic dispersal of New Zealand alpine buttercups: Molecular evidence under split decomposition.
Annals of the Missouri Botanical Garden. 88(3), 458-477
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Abstract:
Huber, KT., Moulton, V., Lockhart, P., & Dress, A. (2001). Pruned median networks: A technique for reducing the complexity of median networks.
Molecular Phylogenetics and Evolution. 19(2), 302-310
[Journal article]Authored by: Lockhart, P.Read Abstract:
Mclenachan, PA., Stöckler, K., Winkworth, RC., Mcbreen, K., Zauner, S., & Lockhart, PJ. (2000). Markers derived from amplified fragment length polymorphism gels for plant ecology and evolution studies.
Molecular Ecology. 9(11), 1899-1903
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Perrie, LR., Lockhart, PJ., Brownsey, PJ., & Large, MF. (2000). Morphological and molecular concordance for the recognition of two species in the New Zealand Polystichum richardii (Hook.) J. Smith complex.
Plant Systematics and Evolution. 224(1-2), 97-107
[Journal article]Authored by: Lockhart, P.Read Abstract:
Steel, M., Huson, D., & Lockhart, PJ. (2000). Invariable sites models and their use in phylogeny reconstruction.
Systematic Biology. 49(2), 225-232
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lockhart, PJ., Huson, D., Maier, U., Fraunholz, MJ., Van De Peer, Y., Barbrook, AC., . . . Steel, MA. (2000). How molecules evolve in eubacteria [3].
Molecular Biology and Evolution. 17(5), 835-838
[Journal article]Authored by: Lockhart, P.
Howe, CJ., Barbrook, AC., & Lockhart, PJ. (2000). Organelle genes - Do they jump or are they pushed?.
Trends in Genetics. 16(2), 65-66
[Journal article]Authored by: Lockhart, P.
Hickson, RE., Slack, KE., & Lockhart, P. (2000). Phylogeny recapitulates geography, or why New Zealand has so many species of skinks.
Biological Journal of the Linnean Society. 70(3), 415-433
[Journal article]Authored by: Lockhart, P.Read Abstract:
Wägele, JW., Erikson, T., Lockhart, P., & Misof, B. (1999). The Ecdysozoa: Artifact or monophylum?.
Journal of Zoological Systematics and Evolutionary Research. 37(4), 211-223
[Journal article]Authored by: Lockhart, P.Read Online:
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Winkworth, RC., Robertson, AW., Ehrendorfer, F., & Lockhart, PJ. (1999). The importance of dispersal and recent speciation in the flora of New Zealand.
Journal of Biogeography. 26(6), 1323-1325
[Journal article]Authored by: Lockhart, P., Robertson, A.Read Online:
Hurr, KA., Lockhart, PJ., Heenan, PB., & Penny, D. (1999). Evidence for the recent dispersal of Sophora (Leguminosae) around the Southern Oceans: Molecular data.
Journal of Biogeography. 26(3), 565-577
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Howe, CJ., Barbrook, AC., Larkum, AWD., & Penny, D. (1999). Spectral analysis, systematic bias, and the evolution of chloroplasts [3].
Molecular Biology and Evolution. 16(4), 573-576
[Journal article]Authored by: Lockhart, P.Read Online:
Barbrook, AC., Lockhart, PJ., & Howe, CJ. (1998). Phylogenetic analysis of plastid origins based on secA sequences.
Current Genetics. 34(4), 336-341
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Steel, MA., Barbrook, AC., Huson, DH., Charleston, MA., & Howe, CJ. (1998). A covariotide model explains apparent phylogenetic structure of oxygenic photosynthetic lineages.
Molecular Biology and Evolution. 15(9), 1183-1188
[Journal article]Authored by: Lockhart, P.Read Online:
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Sivakumaran, S., Lockhart, PJ., & Jarvis, BDW. (1997). Identification of soil bacteria expressing a symbiotic plasmid from Rhizobium leguminosarum bv. trofolii.
Canadian Journal of Microbiology. 43(2), 164-177
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Steel, MA., & Larkum, AWD. (1996). Erratum: Gene duplication and the evolution of photosynthetic reaction center proteins (FEBS 16994) (FEBS Letters 385 (1996) 193-196).
FEBS Letters. 390(2), 242
[Journal article]Authored by: Lockhart, P.Read Online:
Lockhart, PJ., Steel, MA., & Larkum, AWD. (1996). Gene duplication and the evolution of photosynthetic reaction center proteins.
FEBS Letters. 385(3), 193-196
[Journal article]Authored by: Lockhart, P.Read Online:
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Leung, E., Print, CG., Parry, DAD., Closey, DN., Lockhart, PJ., Skinner, SJM., . . . Krissansen, GW. (1996). Cloning of novel kinectin splice variants with alternative C-termini: Structure, distribution and evolution of mouse kinectin.
Immunology and Cell Biology. 74(5), 421-433
[Journal article]Authored by: Lockhart, P.Read Online:
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Penny, D., Hendy, MD., Lockhart, PJ., & Steel, MA. (1996). Corrected parsimony, minimum evolution, and Hadamard conjugations.
Systematic Biology. 45(4), 596-606
[Journal article]Authored by: Lockhart, P.Read Online:
Lockhart, PJ., Larkum, AWD., Steel, MA., Waddell, PJ., & Penny, D. (1996). Evolution of chlorophyll and bacteriochlorophyll: The problem of invariant sites in sequence analysis.
Proceedings of the National Academy of Sciences of the United States of America. 93(5), 1930-1934
[Journal article]Authored by: Lockhart, P.Read Online:
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McLenachan, PA., Lockhart, PJ., Faber, HR., & Mansfield, BC. (1996). Evolutionary Analysis of the Multigene Pregnancy-Specific β<inf>1</inf>-Glycoprotein Family: Separation of Historical and Nonhistorical Signals.
Journal of Molecular Evolution. 42(2), 273-280
[Journal article]Authored by: Lockhart, P., McLenachan, P.Read Online:
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Lockhart, PJ., Penny, D., & Meyer, A. (1995). Testing the phylogeny of swordtail fishes using split decomposition and spectral analysis.
Journal of Molecular Evolution. 41(5), 666-674
[Journal article]Authored by: Lockhart, P.Read Online:
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Steel, M., Lockhart, PJ., & Penny, D. (1995). A Frequency-Dependent Significance Test for Parsimony.
Molecular Phylogenetics and Evolution. 4(1), 64-71
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Steel, MA., Hendy, MD., & Penny, D. (1994). Recovering evolutionary trees under a more realistic model of sequence evolution.
Molecular Biology and Evolution. 11(4), 605-612
[Journal article]Authored by: Lockhart, P.Read Abstract:
Steel, MA., Lockhart, PJ., & Penny, D. (1993). Confidence in evolutionary trees from biological sequence data.
Nature. 364(6436), 440-442
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Penny, D., Hendy, MD., & Larkum, ADW. (1993). Is Prochlorothrix hollandica the best choice as a prokaryotic model for higher plant Chl a/b photosynthesis?.
Photosynthesis Research. 37(1), 61-68
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Beanlandi, TJ., Howe, CJ., & Larkum, AWD. (1992). Sequence of Prochloron didemni atpBE and the inference of chloroplast origins.
Proceedings of the National Academy of Sciences of the United States of America. 89(7), 2742-2746
[Journal article]Authored by: Lockhart, P.Read Abstract:
Lockhart, PJ., Howe, CJ., Bryant, DA., Beanland, TJ., & Larkum, AWD. (1992). Substitutional bias confounds inference of cyanelle origins from sequence data.
Journal of Molecular Evolution. 34(2), 153-162
[Journal article]Authored by: Lockhart, P.Read Abstract:
Howe, CJ., Beanland, TJ., Larkum, AWD., & Lockhart, PJ. (1992). Plastid origins.
Trends in Ecology and Evolution. 7(11), 378-383
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Penny, D., Hendy, MD., Howe, CJ., Beanland, TJ., & Larkum, AWD. (1992). Controversy on chloroplast origins.
FEBS Letters. 301(2), 127-131
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Larkum, AWD., Beanland, TJ., & Howe, CJ. (1989). The isolation of high molecular mass DNA from the prochlorophyte Prochloron didemni.
FEBS Letters. 248(1-2), 127-130
[Journal article]Authored by: Lockhart, P.Read Online:
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Lockhart, PJ., Larkum, AWD., Beanland, TJ., & Howe, CJ. (1989). The isolation of high molecular mass DNA from the prochlorophyte Prochloron didemni.
FEBS Letters. 248(1-2), 127-130
[Journal article]Authored by: Lockhart, P.Read Online:
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